Sarah Cobey: search on Z-Library

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1

Middle-aged individuals may be in a perpetual state of H3N2 influenza virus susceptibility

Gouma, Sigrid, Kim, Kangchon, Weirick, Madison E., Gumina, Megan E., Branche, Angela, Topham, David J., Martin, Emily T., Monto, Arnold S., Cobey, Sarah, Hensley, Scott E.

Journal:

Nature Communications

Year:

2020

File:

PDF, 3.74 MB

2020

2

Poor immunogenicity, not vaccine strain egg adaptation, may explain the low H3N2 influenza vaccine effectiveness in 2012-13

Cobey, Sarah, Gouma, Sigrid, Parkhouse, Kaela, Chambers, Benjamin S, Ertl, Hildegund C, Schmader, Kenneth E, Halpin, Rebecca A, Lin, Xudong, Stockwell, Timothy B, Das, Suman R, Landon, Emily, Tesic, V

Journal:

Clinical Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 1.09 MB

english, 2018

3

Estimating Vaccine-Driven Selection in Seasonal Influenza

Wen, Frank, Bell, Sidney, Bedford, Trevor, Cobey, Sarah

Journal:

Year:

2018

Language:

english

File:

PDF, 2.25 MB

english, 2018

4

Pathogen Diversity and Hidden Regimes of Apparent Competition.

Sarah Cobey and Marc Lipsitch

Journal:

American Naturalist

Year:

2013

Language:

english

File:

PDF, 370 KB

english, 2013

5

Ecological factors driving the long-term evolution of influenza's host range

Sarah Cobey, Mercedes Pascual and Ulf Dieckmann

Journal:

Proceedings Biological Sciences

Year:

2010

Language:

english

File:

PDF, 1.50 MB

english, 2010

6

Predicting the Epidemic Sizes of Influenza A/H1N1, A/H3N2, and B: A Statistical Method

Goldstein, Edward, Cobey, Sarah, Takahashi, Saki, Miller, Joel C., Lipsitch, Marc, Cummings, Derek A. T.

Journal:

Year:

2011

Language:

english

File:

PDF, 815 KB

english, 2011

7

Immune history and influenza virus susceptibility

Cobey, Sarah, Hensley, Scott E

Journal:

Current Opinion in Virology

Year:

2017

Language:

english

File:

PDF, 450 KB

english, 2017

8

Contemporary H3N2 influenza viruses have a glycosylation site that alters binding of antibodies elicited by egg-adapted vaccine strains

Zost, Seth J., Parkhouse, Kaela, Gumina, Megan E., Kim, Kangchon, Diaz Perez, Sebastian, Wilson, Patrick C., Treanor, John J., Sant, Andrea J., Cobey, Sarah, Hensley, Scott E.

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 832 KB

english, 2017

9

Bayesian phylodynamics of avian influenza A virus H9N2 in Asia with time-dependent predictors of migration

Yang, Jing, Müller, Nicola F., Bouckaert, Remco, Xu, Bing, Drummond, Alexei J., Cobey, Sarah

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 2.52 MB

english, 2019

10

Capturing escape in infectious disease dynamics

Sarah Cobey, Katia Koelle

Journal:

Trends in Ecology & Evolution

Year:

2008

Language:

english

File:

PDF, 347 KB

english, 2008

11

Correction to: CpGâcreating mutations are costly in many human viruses

Caudill, Victoria R., Qin, Sarina, Winstead, Ryan, Kaur, Jasmeen, Tisthammer, Kaho, Pineda, E. Geo, Solis, Caroline, Cobey, Sarah, Bedford, Trevor, Carja, Oana, Eggo, Rosalind M., Koelle, Katia, Lythg

Journal:

Evolutionary Ecology

Year:

2020

File:

PDF, 339 KB

2020

12

Improving influenza vaccine virus selection: report of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14-16 June 2010

Ampofo, William K., Baylor, Norman, Cobey, Sarah, Cox, Nancy J., Daves, Sharon, Edwards, Steven, Ferguson, Neil, Grohmann, Gary, Hay, Alan, Katz, Jacqueline, Kullabutr, Kornnika, Lambert, Linda, Levan

Journal:

Influenza and Other Respiratory Viruses

Year:

2013

Language:

english

File:

PDF, 68 KB

english, 2013

13

1203. Epidemiology of Respiratory Viruses in Influenza-Vaccinated Healthcare Workers During an H1N1-Dominant Season

Wohrley, Julie, Collison, Maggie, Marrs, Rachel, Marchese, Ed, Beavis, Kathleen, Bartlett, Allison, Wilson, Patrick, Cobey, Sarah, Landon, Emily

Journal:

Open Forum Infectious Diseases

Year:

2019

File:

PDF, 348 KB

2019

14

Does influenza drive absolute humidity?

Baskerville, Edward B., Cobey, Sarah

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 581 KB

english, 2017

15

CpG-creating mutations are costly in many human viruses

Caudill, Victoria R., Qin, Sarina, Winstead, Ryan, Kaur, Jasmeen, Tisthammer, Kaho, Pineda, E. Geo, Solis, Caroline, Cobey, Sarah, Bedford, Trevor, Carja, Oana, Eggo, Rosalind M., Koelle, Katia, Lythg

Journal:

Evolutionary Ecology

Year:

2020

File:

PDF, 2.35 MB

2020

16

Global Migration Dynamics Underlie Evolution and Persistence of Human Influenza A (H3N2)

Bedford, Trevor, Cobey, Sarah, Beerli, Peter, Pascual, Mercedes, Ferguson, Neil M.

Journal:

Year:

2010

Language:

english

File:

PDF, 397 KB

english, 2010

17

Age-specific differences in the dynamics of protective immunity to influenza

Ranjeva, Sylvia, Subramanian, Rahul, Fang, Vicky J., Leung, Gabriel M., Ip, Dennis K. M., Perera, Ranawaka A. P. M., Peiris, J. S. Malik, Cowling, Benjamin J., Cobey, Sarah

Journal:

Nature Communications

Year:

2019

File:

PDF, 1.15 MB

2019

18

Consequences of host heterogeneity, epitope immunodominance, and immune breadth for strain competition

Sarah Cobey, Mercedes Pascual

Journal:

Journal of Theoretical Biology

Year:

2011

Language:

english

File:

PDF, 651 KB

english, 2011

19

Trade-offs in antibody repertoires to complex antigens

Childs, Lauren M., Baskerville, Edward B., Cobey, Sarah

Journal:

Philosophical Transactions Biological Sciences

Year:

2015

Language:

english

File:

PDF, 919 KB

english, 2015

20

Limits to Causal Inference with State-Space Reconstruction for Infectious Disease

Cobey, Sarah, Baskerville, Edward B., Reich, Nicholas G.

Journal:

Year:

2016

Language:

english

File:

PDF, 4.95 MB

english, 2016

21

Comparison of human H3N2 antibody responses elicited by egg-based, cell-based, and recombinant protein-based influenza vaccines during the 2017-2018 season

Gouma, Sigrid, Zost, Seth J, Parkhouse, Kaela, Branche, Angela, Topham, David J, Cobey, Sarah, Hensley, Scott E

Journal:

Clinical Infectious Diseases

Year:

2019

Language:

english

File:

PDF, 689 KB

english, 2019

22

Pathogen evolution and the immunological niche

Journal:

Annals of the New York Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 455 KB

english, 2014

23

Host-Pathogen Coevolution and the Emergence of Broadly Neutralizing Antibodies in Chronic Infections

Nourmohammad, Armita, Otwinowski, Jakub, Plotkin, Joshua B., Cobey, Sarah

Journal:

Year:

2016

Language:

english

File:

PDF, 812 KB

english, 2016

24

Modeling infectious disease dynamics

Journal:

Year:

2020

File:

PDF, 439 KB

2020

25

Selection and neutral mutations drive pervasive mutability losses in long-lived anti-HIV B cell lineages

Vieira, Marcos C, Zinder, Daniel, Cobey, Sarah

Journal:

Molecular Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 1.70 MB

english, 2018

26

Repeated Vaccination May Protect Children From Influenza Infection

Journal:

JAMA Network Open

Year:

2018

Language:

english

File:

PDF, 284 KB

english, 2018

27

Fighting microbial drug resistance: a primer on the role of evolutionary biology in public health

Perron, Gabriel G., Inglis, R. Fredrik, Pennings, Pleuni S., Cobey, Sarah

Journal:

Evolutionary Applications

Year:

2015

Language:

english

File:

PDF, 133 KB

english, 2015

28

Explaining the geographical origins of seasonal influenza A (H3N2)

Wen, Frank, Bedford, Trevor, Cobey, Sarah

Journal:

Proceedings Biological Sciences

Year:

2016

Language:

english

File:

PDF, 601 KB

english, 2016

29

Characterization of the immunologic repertoire: A quick start guide

Wilson, Patrick C., Cobey, Sarah

Journal:

Immunological Reviews

Year:

2018

Language:

english

File:

PDF, 267 KB

english, 2018

30

The evolution within us

Cobey, Sarah, Wilson, Patrick, Matsen, Frederick A.

Journal:

Philosophical Transactions Biological Sciences

Year:

2015

Language:

english

File:

PDF, 355 KB

english, 2015

31

Immune History and Influenza Vaccine Effectiveness

Lewnard, Joseph, Cobey, Sarah

Journal:

Year:

2018

Language:

english

File:

PDF, 311 KB

english, 2018

32

Response to Skowronski and De Serres

Cobey, Sarah, Grad, Yonatan H

Journal:

Clinical Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 108 KB

english, 2018

33

Strength and tempo of selection revealed in viral gene genealogies

Trevor Bedford, Sarah Cobey, Mercedes Pascual

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 792 KB

english, 2011

34

Improving influenza vaccine virus selectionReport of a WHO informal consultation held at WHO headquarters, Geneva, Switzerland, 14–16 June 2010

WHO Writing Group, William K. Ampofo, Norman Baylor, Sarah Cobey, Nancy J. Cox, Sharon Daves, Steven Edwards, Neil Ferguson, Gary Grohmann, Alan Hay, Jacqueline Katz, Kornnika Kullabutr, Linda Lambert

Journal:

Influenza and Other Respiratory Viruses

Year:

2012

Language:

english

File:

PDF, 188 KB

english, 2012

35

Predation and Competition in Ambystoma Larvae: Field and Laboratory Experiments

Sarah L. Stenhouse, Nelson G. Hairston and A. Elizabeth Cobey

Journal:

Journal of Herpetology

Year:

1983

Language:

english

File:

PDF, 372 KB

english, 1983

36

Host population structure and treatment frequency maintain balancing selection on drug resistance

Cobey, Sarah, Baskerville, Edward B., Colijn, Caroline, Hanage, William, Fraser, Christophe, Lipsitch, Marc

Journal:

Journal of The Royal Society Interface

Year:

2017

Language:

english

File:

PDF, 688 KB

english, 2017

37

Use of an individual-based model of pneumococcal carriage for planning a randomized trial of a whole-cell vaccine

Cai, Francisco Y., Fussell, Thomas, Cobey, Sarah, Lipsitch, Marc, Viboud, Cecile

Journal:

PLoS Computational Biology

Year:

2018

Language:

english

File:

PDF, 1.95 MB

english, 2018

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